BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007B04LP1|AL425636
(687 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1736 1094 0.0
>3x_Contig1736
Length = 21222
Score = 1094 bits (541), Expect = 0.0
Identities = 638/680 (93%), Gaps = 1/680 (0%)
Strand = Plus / Plus
Query: 8 tgtttwtccaatataccttgcctcacctcatctcttggaacatttcgaactttaatwgat 67
||||| |||||||||||| || |||||||||||||||||||||||||||||||||| |||
Sbjct: 11044 tgtttgtccaatatacct-gcatcacctcatctcttggaacatttcgaactttaatagat 11102
Query: 68 atggcaaaacaatgcmactcatttcaatggtttgagggaaaacatatttctttcatacag 127
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11103 atggcaaaacaatgcaactcatttcaatggtttgagggaaaacatatttctttcatacag 11162
Query: 128 ccatacagccacggtatatctgccaagttaggacagcgattgtgaactgtttagmatctt 187
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 11163 ccatacagccacggtatatctgcaaagttaggacagcgattgtgaactgtttagaatctt 11222
Query: 188 cgaatttttgamgttgaaacgmtcaggagcyataatmttgtttatcaagagamacttgtg 247
||||||||||| ||||||||| |||||||| ||||| ||||||||||||||| |||||||
Sbjct: 11223 cgaatttttgaagttgaaacgatcaggagctataatattgtttatcaagagaaacttgtg 11282
Query: 248 aatgacaggmcaatgcttaggactaacaggcgttcgccctcgttaagamaggmgaactca 307
||||| ||| |||||||||||||||| |||||||||| |||||||||| ||| |||||||
Sbjct: 11283 aatgaaaggacaatgcttaggactaaaaggcgttcgcactcgttaagaaaggagaactca 11342
Query: 308 cccacaagacacgacggatcaagtgamagtyggggtagccgatccaggagatcctcgatt 367
||||||||| |||||||||||||||| ||| |||||||| ||||||||||||| ||||||
Sbjct: 11343 cccacaagaaacgacggatcaagtgaaagtaggggtagcagatccaggagatcatcgatt 11402
Query: 368 actgacgttagctcaggsgtgagaggcgacttgacaagacgcmattccgttmagcmtggt 427
||||||||||||||||| |||||||| || |||| ||||||| |||||||| ||| ||||
Sbjct: 11403 actgacgttagctcaggagtgagaggagaattgaaaagacgcaattccgttaagcatggt 11462
Query: 428 gccgatgactccgamacagacagctcttggcaggcttcacgacggctaatcttcatcttt 487
|||||||||||||| ||||| || |||||| ||| |||| ||||||||||||||||||||
Sbjct: 11463 gccgatgactccgaaacagaaagatcttggaaggattcaagacggctaatcttcatcttt 11522
Query: 488 ggtgccatgctgggtttactgctagcactttggtttggctcgtctaccgncaagtatagg 547
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 11523 ggtgcaatgctgggtttactgctagcactttggtttggctcgtctaccgacaagtatagg 11582
Query: 548 cctgatatatttgacaacttttacgtgttggagtccgtccaayattacgttggtgattgg 607
|||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 11583 aatgatatatttgaaaacttttacgtgttggagtccgtccaaaattacgttggtgattgg 11642
Query: 608 aaaggcctgttaccgcaaagcgtttccagtttgattgacgatttccaatttgacaacaca 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11643 aaaggcctgttaccgcaaagcgtttccagtttgattgacgatttccaatttgacaacaca 11702
Query: 668 caagcggacttgactgaatc 687
||||||||||||||||||||
Sbjct: 11703 caagcggacttgactgaatc 11722
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2952
Number of Sequences: 1807
Number of extensions: 2952
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 687
length of database: 10,358,551
effective HSP length: 16
effective length of query: 671
effective length of database: 10,329,639
effective search space: 6931187769
effective search space used: 6931187769
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.7 bits)
S2: 49 (99.5 bits)